Results
Scores are ACC unless noted. Average is the unweighted mean of the four ACC values, the convention the GraphRAG-Bench leaderboard uses.GraphRAG-Bench (Medical) — Average 76.87
GraphRAG-Bench (Novel) — Average 66.09
Against the published leaderboard
Competitor figures are taken from the GraphRAG-Bench leaderboard as published; we did not re-run them. All entries usegpt-4o-mini as the generation
backbone.
Configuration
Per the benchmark’s Appendix H.2, GraphRAG-SDK’s own defaults are preserved rather than tuned to the benchmark; the protocol is matched on the backbone model and the judge.Declared deviations from SDK defaults
Two settings were raised above the SDK’s own defaults. Both are single global values, chosen before any results were scored, and applied identically to both subsets.enable_cypher = True(SDK defaultFalse) — ontology-guided text-to-Cypher retrieval is a core GraphRAG-SDK capability, enabled so the measurement reflects the framework as deployed. It contributed to 22% of Medical and 29% of Novel answers.embedding_dimension = 1024(SDK default256) — the same vector width asbge-large-en-v1.5, the embedding model Appendix H.2 specifies for evaluated systems.
Benchmark integrity
The ontologies were hand-authored from the corpus only. The question sets and theevidence, evidence_relations and evidence_triple fields were never
read during ontology design or indexing.
Both are published here so this is checkable without needing the runner:
They contain only domain type definitions — entity labels, their descriptions
and properties, and the relation patterns between them. No question, answer or
evidence text appears in either file.
How the run works
Per subset, the pipeline runs in three stages:- Index — each corpus document is chunked, and entities and relationships are extracted against that subset’s ontology into its own FalkorDB graph (one graph per document, so retrieval is scoped to the document a question was written against).
- Answer — every question in the subset is answered through
MultiPathRetrieval, with the retrieved context recorded alongside the answer. - Judge — answers are scored by the benchmark’s own
Evaluation/generation_eval.py, unmodified, withgpt-4o-minias judge andbge-large-en-v1.5embeddings.
Counts and caveats
Two things worth stating plainly:
Novel is 2009 rather than 2010. The dataset contains a duplicate question
id (
Novel-55f0c0e2) carrying identical question text under two different
source values with contradictory ground truths — one answers the question
asked, the other is unrelated. Our runner answers each id once. This has been
reported to the benchmark authors.
The evaluator skips samples whose judge call raises, so the averages are
over 2053 of 2062 Medical and 1995 of 2009 Novel predictions. Every prediction
itself succeeded; there were no generation failures or empty answers in either
subset.
Leaderboard figures as published at graphrag-bench.github.io. Last updated: August 2026.